Pairwise Alignments

Query, 374 a.a., Lipopolysaccharide core biosynthesis protein RfaG from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 392 a.a., glycosyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 202 VGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR-KFEALAEKRGVRSNVHFFSG 260
           VGS   RKG D  +EAL  +    R      +VG    R + E L  ++G+   + F   
Sbjct: 225 VGSVSKRKGQDMIVEALVKMSPVQREKVHFTIVGDGTLRGELEKLCFEKGISKYIDFIGV 284

Query: 261 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG 304
            N V   +  +D+ + P+  E   I +LEA+ AGLP+++T + G
Sbjct: 285 SNQVENYLLRSDIFMLPSRDEGFPISILEAMRAGLPIISTNIAG 328