Pairwise Alignments

Query, 319 a.a., L,D-transpeptidase LdtC from Escherichia coli ECRC99

Subject, 321 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

 Score =  199 bits (507), Expect = 6e-56
 Identities = 114/298 (38%), Positives = 173/298 (58%), Gaps = 11/298 (3%)

Query: 17  AAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAKKYNVGFLALLQANPGV 76
           AA+  A  + A   PLPP G  +VG+ +    + +  +  AI + +++G+L L+ ANPGV
Sbjct: 15  AALLSAGTSAALELPLPPEGEDIVGQIQVIKAKYED-TFAAIGETHDLGYLELVAANPGV 73

Query: 77  DPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDT 136
           DP++P  G+ + +P + +LP  PREG+VINIAE RLYYYP G+N V  +P+GIG+ G   
Sbjct: 74  DPWLPGEGTDIILPTRFILPPGPREGVVINIAEYRLYYYPQGENVVHTFPLGIGREGWG- 132

Query: 137 LTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGV 196
            +P   T +S   +NP W P  +IR  + A G  LP VVP GPDNP+G + + LA  G  
Sbjct: 133 -SPVGNTRISAMTSNPAWYPPQSIRDEHAADGDPLPTVVPPGPDNPLGPYKMSLALPG-- 189

Query: 197 YLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLV 256
           YL+HG+N  FGIGMRVS GC R+ + ++  L   V  GT V II+ P K      G   +
Sbjct: 190 YLIHGSNKKFGIGMRVSHGCFRMLNHNVLELAKMVKVGTPVRIIDEPYKFGVS-EGKVYL 248

Query: 257 EVHQPLSEKIDDDPQLL---PITLNSAMQSFKDAAQ--TDAEVMQHVMDVRSGMPVDV 309
           E H PL +       L+    + +N+ ++  + A +   D E+++ ++    G+P+ +
Sbjct: 249 EAHAPLEDGEQKTLTLMDKHAVVINTLLKRDEAAGKLHLDWEMVREIIAGEDGLPIQI 306