Pairwise Alignments

Query, 319 a.a., L,D-transpeptidase LdtC from Escherichia coli ECRC99

Subject, 304 a.a., ErfK/YbiS/YcfS/YnhG (RefSeq) from Shewanella amazonensis SB2B

 Score =  315 bits (808), Expect = 7e-91
 Identities = 161/297 (54%), Positives = 211/297 (71%), Gaps = 6/297 (2%)

Query: 15  FAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAKKYNVGFLALLQANP 74
           F + ++    A A  +PLP   SRLVGEN+++VV +D  +LE IA ++ +G   L++ANP
Sbjct: 10  FFSLISFCQSALAVIYPLPAKDSRLVGENQYYVVPDDKRTLEDIAAQFQLGLSNLMEANP 69

Query: 75  GVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGG 134
           GVDP++P+ GS L IP Q +LPDAPREGIVINIAE+RLYYYP GK  V V PIGIGQ+G 
Sbjct: 70  GVDPFLPKPGSTLIIPHQLILPDAPREGIVINIAEMRLYYYPKGKKIVEVLPIGIGQVGR 129

Query: 135 DTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYG 194
           DT     VTTV  KRANPTWTPTA IR  Y A+G+ LP V PAGPDNPMG  A+ +   G
Sbjct: 130 DT-PENWVTTVQRKRANPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLFALYI---G 185

Query: 195 GVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGAR 254
            +Y +HGTNA FGIG+RVS GC+RLRD DI+ LF+ V  GT+V  +N PIK + EP+GAR
Sbjct: 186 NLYAIHGTNATFGIGLRVSQGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKATEEPDGAR 245

Query: 255 LVEVHQPLS--EKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDV 309
            +EVHQPLS  +   D  + +P+TL +A+  F   A+TD+ V++ +++ R+GMP  +
Sbjct: 246 YLEVHQPLSRTQAEFDSAEPVPLTLPTAISRFVAHAETDSFVLKRLLEARTGMPTRI 302