Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein FlgD from Escherichia coli ECRC99

Subject, 229 a.a., Flagellar hook capping protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 74.7 bits (182), Expect = 1e-18
 Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 23/189 (12%)

Query: 5   VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64
           +T+T  T T    TS+S+ + S   +    FLT+L  QLKNQ+P NP + NE+T QL   
Sbjct: 4   ITSTSSTETSGKATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQLISY 63

Query: 65  STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124
           S              +  QI  +Q L+  NL+         T LA  G E    +    F
Sbjct: 64  S-------------QVEQQILGNQYLE--NLVLSTNNQTAETALAFVGKEVVYTSDNREF 108

Query: 125 GVE-------LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNG 177
             E       + ++A  V+  +T+  G V+ +       +G ++FTWDG  T GS A +G
Sbjct: 109 SGEKIDWKMTVPESAKSVSFVVTNAKGDVIYS-KTETPESGAYTFTWDGATTAGSKAVDG 167

Query: 178 SYNVAISAS 186
           SY +   A+
Sbjct: 168 SYTLTAKAT 176