Pairwise Alignments

Query, 231 a.a., flagellar hook assembly protein FlgD from Escherichia coli ECRC99

Subject, 225 a.a., flagellar hook capping protein from Marinobacter adhaerens HP15

 Score =  117 bits (292), Expect = 2e-31
 Identities = 77/229 (33%), Positives = 119/229 (51%), Gaps = 9/229 (3%)

Query: 4   AVTTTDPTNTGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62
           AV  TD ++            G   ++L ++ F+ L++AQLKNQ+P  P EN E  SQLA
Sbjct: 3   AVNATDASDVLSQYQLKQQNGGQGTSELGRNEFMELMLAQLKNQNPLEPQENGEFISQLA 62

Query: 63  QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122
           Q S++  ++ L+ T+  + GQ  ++Q+LQAS ++G  V+ P    + G    EG +T T 
Sbjct: 63  QFSSLEEMQNLSGTVEDVVGQFRSTQALQASAMVGKTVLAPSQIGILGA---EGEITGT- 118

Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182
              +++  +   +  +I  +NG  VR ID+G   AGV SF WDG   +G+  P G Y + 
Sbjct: 119 ---IQVPASTGGLRLSIEGQNGERVRQIDMGSSQAGVVSFRWDGQDGNGNPLPPGPYRIV 175

Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNNGN-TLDLGTYGTTTLDEVRQI 230
             AS          +  A V  V  G  G+ TL+L   G+  L +V+QI
Sbjct: 176 AEASYPDGPQQLGTMVSANVDSVSLGQGGSITLNLAGMGSIALSDVKQI 224