Pairwise Alignments

Query, 436 a.a., ABC transporter permease from Escherichia coli ECRC99

Subject, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (380), Expect = 6e-41
 Identities = 102/374 (27%), Positives = 193/374 (51%), Gaps = 23/374 (6%)

Query: 31  KFAFLNLFRHKRRSFSTITAIVLGGVAIFLYGGFIDYSFWILKEQTIRTNIGHVQIYNQH 90
           + A LNL R++RRS  +I+ I +  +A+   GGF  Y++  L+E T R ++GH+ +  + 
Sbjct: 10  RLAALNLQRNRRRSLLSISIIAIAVLALTSAGGFGLYTYDSLRESTAR-DVGHLTLSQRG 68

Query: 91  YF----ETSNKNKSLIADYAALKKAILSDPTLAADISTLSGQLEFTGVISHYESETSSYF 146
           YF    ET   N    +D+  +++ +L++P +      +  ++E TG++S+   + S+ F
Sbjct: 69  YFAQEEETPLANGLEGSDH--IRQVLLANPAIRG----IQPRIELTGLVSN--GQKSTIF 120

Query: 147 SALGVEPLPALKLGSFDKIIAGSDLSRVKGD-------EITLGSGLAKTLNAKYDDWLDV 199
             LGV+       G F  + AG  L   K         ++ LG  LA+ L+    DW+ +
Sbjct: 121 VGLGVDDKEFDMKGPFLDLRAGQTLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWVTL 180

Query: 200 MVVNTAGGQGALSLKMRGIFESGIKDYDDVAMKIPLDTAQRMMGTDGVSKVLI-LLKEDD 258
           +     G   AL  ++RG++ +G+ + D   + + L +AQ ++ +  VS + + L   ++
Sbjct: 181 LATTADGALNALDFQVRGLYSTGVPELDKRQLYLHLASAQELLNSSKVSTLSVYLFNTEN 240

Query: 259 TAAFSAKLRQFIERNHLP--LVVKDWRDVSLFYQQVEGLLSGIYFFIKLIVALIVIFMIG 316
           T      +   + +  L   L V  W+ ++ FY +V+ L   ++  +  ++A++V   + 
Sbjct: 241 TQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMVVFVALF 300

Query: 317 NSMAMNIVERTREITTLRAIGLKPLHVTRLFLTEGIFIGVIGAVGSLLVGGVLAWIINLY 376
           N++ M++ ERTREI TL A+G  P  +   F+ E   + + G++   L+ G+    + + 
Sbjct: 301 NTLTMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTGITIVAVRVA 360

Query: 377 GIAMPPSPGQTIGY 390
            I MPP PG+T GY
Sbjct: 361 DIQMPPPPGRTEGY 374