Pairwise Alignments

Query, 436 a.a., ABC transporter permease from Escherichia coli ECRC99

Subject, 416 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella sp. ANA-3

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 29/292 (9%)

Query: 102 IADYAALKKAILSDP--TLAADISTLSGQLEFTGVISHYESETSSYFSALGVEPLPALKL 159
           IAD+ A+++  +     T AA    + G ++  G             + +G++P    K+
Sbjct: 75  IADWRAVEQTAMQIEGITAAAPFIRMQGLVQKPGGFQG--------LAVVGIDPEQEAKV 126

Query: 160 GSFDKIIAGSDLSRVKGDE--ITLGSGLAKTLNAKYDDWLDVMVVNTAGGQGALSLK--- 214
            +  + ++      +  D+  I LG  L K L  +  D L  + V     + A SL+   
Sbjct: 127 STLAQFMSKETWQGLSEDDNHIVLGESLLKKLGLEVGDTL-ALYVQDLDPEHAGSLRAAK 185

Query: 215 -----MRGIFESGIKDYDDVAMKIPLDTAQRMMGT-DGVSKVLILLKEDDTAAFSAKLRQ 268
                + G++  G  + +     IP+  A  ++    GV+ V I + +   A   AK+R+
Sbjct: 186 SHRFVVSGVYRLG-GELELTTAYIPMRYAANILNLHQGVTGVRISVAQVFDAP--AKIRE 242

Query: 269 FIERNHLPLVVKDW-RDVSLFYQQVEGLLSGIYFFIKLIVALIVIFMIGNSMAMNIVERT 327
                +  + + DW R     YQ ++ L+  I + + ++V  +  F I +++ M + ++ 
Sbjct: 243 LGYALNQSVYISDWTRTQGHLYQDIQ-LVRTIMYLVLVLVIGVACFNIVSTLVMAVRDKA 301

Query: 328 REITTLRAIGLKPLHVTRLFLTEGIFIGVIGAVGSLLVGGVLAWIINLYGIA 379
            EI  L  +GL  L V  +F+ +G   G++G     ++G  +A  INL GIA
Sbjct: 302 SEIAILMTMGLSRLSVMGIFMVQGALNGLVGCALGGVIG--IATAINLSGIA 351