Pairwise Alignments

Query, 417 a.a., membrane integrity-associated transporter subunit PqiA from Escherichia coli ECRC99

Subject, 427 a.a., PqiA family integral membrane protein (RefSeq) from Shewanella sp. ANA-3

 Score =  256 bits (655), Expect = 7e-73
 Identities = 151/419 (36%), Positives = 237/419 (56%), Gaps = 22/419 (5%)

Query: 13  CSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVN 72
           C +C ++      + G +A CPRC   L      P Q   AY  A L ML LS  FPF++
Sbjct: 16  CEECGLVTPYTEPKPGYRAHCPRCQHGLQSVLATPFQPIWAYGAATLIMLGLSLGFPFLS 75

Query: 73  MNVAGVTSEITLLEIPGVLFSEDYAS---LGTFFLLFVQLVPAFCLITILLLVNRAELPV 129
            +V G++ + +L      L S  YAS   L    LL V ++P   +   +L+  +A L  
Sbjct: 76  FSVQGLSQKASLWS---ALISMHYASNSLLALVILLCVVILPLIYISFSMLIYRQAYLVQ 132

Query: 130 RLK-------EQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCV 182
           + +       ++ ++ +F+ ++W MA++FL G+LV+ VK+++   +G G SF  +C++ +
Sbjct: 133 QGRTIELSWLKRASKWVFRFESWLMADVFLVGILVAMVKILSLAEVGFGPSFWAFCIYTL 192

Query: 183 LQLRAFQCVDRRWLWDDIAPMPELRQP-LKPGVTGIRQGLRSCSCCTAILPADEPVCPRC 241
           L ++    VD  W+WD + P   +  P +  G + ++Q    C  C  +   D   C RC
Sbjct: 193 LLVKFVSLVDSSWVWDKLTP--RVATPYVSVGESHLQQNHGVCPICGQLNAIDATECSRC 250

Query: 242 GTKGYVRR---RNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWS 298
              G V +    NS+Q   A L+ + + Y+PAN  PIM T  +G    STI++GV+LLW 
Sbjct: 251 A--GAVHKYLPANSMQAAWAFLLAATVFYIPANFYPIMYTTSVGQTEASTIISGVVLLWH 308

Query: 299 EGSYPVAAVIFLASIMVPTLKMIAIAWLCWDA-KGHGKRDSERMHLIYEVVEFVGRWSMI 357
            GSYPVA++IF ASI++PT K+ ++A+L   A K H    + +   +Y V EF+GRWSMI
Sbjct: 309 LGSYPVASIIFFASIVIPTAKIASLAYLFRQAGKAHSSDQAIKNQQLYRVTEFIGRWSMI 368

Query: 358 DVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEE 416
           D+FV+A+L+ALV++  LM+I P   AL FA+VVI+TM SA+ FD R+ W +   +  E+
Sbjct: 369 DIFVVALLTALVQLDELMAIKPGPAALSFAMVVILTMLSAIAFDSRVLWRQSSTTNCEK 427