Pairwise Alignments

Query, 586 a.a., 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO from Escherichia coli ECRC99

Subject, 737 a.a., TIGR03549 family protein from Dechlorosoma suillum PS

 Score =  535 bits (1378), Expect = e-156
 Identities = 282/587 (48%), Positives = 374/587 (63%), Gaps = 12/587 (2%)

Query: 3   QTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKG 62
           QT+IPGKD  LE +IA     L+ LG +IE ASW N VPNVWS+HIRD   ++CFTNGKG
Sbjct: 149 QTYIPGKDLPLEQTIANMSAFLAGLGIKIEIASWRNLVPNVWSLHIRDAHSSMCFTNGKG 208

Query: 63  ATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLL 122
           A+K++ALASALGEY ERLS N+F+   + GE IAN PFVHYPNE+WF   + D +P+ +L
Sbjct: 209 ASKESALASALGEYIERLSCNHFYTHQFWGEEIANAPFVHYPNERWFKPGKKDALPKEIL 268

Query: 123 DERLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNG 182
           DE     Y+P+ EL GS LID  SGN  RGIC LPF RQSD + VY P N+I NLY+SNG
Sbjct: 269 DEYCLEIYNPDGELRGSHLIDTNSGNVQRGICCLPFVRQSDGEVVYFPSNLIDNLYLSNG 328

Query: 183 MSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGF 242
           MSAGNT  EA+VQ LSE+FER VK  I+   I+LP++PA+VLA+YP +V  I+ LE +GF
Sbjct: 329 MSAGNTLAEAQVQCLSEIFERAVKREILEGEIALPDVPAEVLAKYPGIVAGIKGLEEQGF 388

Query: 243 PIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDV 302
           P+   D SLGGQ+PV+CV L NP  G  FASFGAHP   VALER++TELLQGR  + L+ 
Sbjct: 389 PVLVKDASLGGQFPVMCVTLMNPRTGGVFASFGAHPSMEVALERSLTELLQGRSFEGLND 448

Query: 303 FTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEE----EFAT 358
              PTF+ + V E  N   HFIDSSG++SW  F   ADY FV+W+FSG  EE    E AT
Sbjct: 449 LPRPTFESQAVTEPNNFVDHFIDSSGVVSWRFFSAKADYDFVEWDFSGHGEESNAHEAAT 508

Query: 359 LMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLP 418
           L  I  +  KE Y+A Y+ LGV ACRI+VPG S+IY  EDL   N +     RE IL+L 
Sbjct: 509 LFGILEEMGKEAYLAVYDQLGVTACRILVPGYSEIYGVEDLIWDNTNKALAFREDILNL- 567

Query: 419 GSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDL 478
                 +    L+++L+E   DD+T +  L+G+    +  W  L I ELK ++ LA G L
Sbjct: 568 -HRLSDKQLAALLQRLEESELDDYTDIIGLIGVEFDENTVWGQLTILELKLLIHLALGQL 626

Query: 479 EQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDR----QPLQYLNAFVRMYGA 534
            +A       ++FN +  + +R  +Y+ +  +L +  ++D         Y   F RM+G 
Sbjct: 627 AEAHDLVGAFLQFNEN--TVDRGLFYQAMNVVLEVVLDKDEGGDLDLADYEANFRRMFGN 684

Query: 535 DAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKA 581
           + ++A   ++ G   F+GL P+   L     HQ L+ +Y+K+  A+A
Sbjct: 685 ERMDAVIGSVQGTLRFHGLTPISMKLEGLDRHQRLIDSYKKVHAARA 731