Pairwise Alignments

Query, 586 a.a., 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO from Escherichia coli ECRC99

Subject, 730 a.a., conserved hypothetical protein from Marinobacter adhaerens HP15

 Score =  562 bits (1448), Expect = e-164
 Identities = 285/581 (49%), Positives = 381/581 (65%), Gaps = 4/581 (0%)

Query: 2   TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGK 61
           TQTFI GKD  LE +IA     L DLG +IE ASW N VP+VWS+HIRD    +CFTNGK
Sbjct: 148 TQTFIEGKDLPLEQTIANMTGILEDLGMKIEIASWRNIVPHVWSLHIRDAASPMCFTNGK 207

Query: 62  GATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGL 121
           GATK++AL SALGE+ ERLS N+F+ D + GE IAN  FVHYPNEKWF    ND++PEG+
Sbjct: 208 GATKESALCSALGEFIERLSCNFFYNDQFFGEDIANSDFVHYPNEKWFKPGPNDELPEGI 267

Query: 122 LDERLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSN 181
           LD+   A Y+P+ EL GS LID  SG  DRGI  LP+ R+SD + VY P N+I NL++SN
Sbjct: 268 LDDHCLAIYNPDGELGGSNLIDTNSGRADRGIVSLPYVRKSDGEVVYFPSNLIENLFLSN 327

Query: 182 GMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEG 241
           GMSAGNT NEA+VQ LSE+FER VK +II E I+LP++P +VL +YP ++E IE LEA+G
Sbjct: 328 GMSAGNTLNEAQVQCLSEIFERAVKKQIIEEEIALPDVPREVLEKYPNILEGIEALEAQG 387

Query: 242 FPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLD 301
           FP    D SLGGQ+PV+CV L NP  G  FASFGAHP F VALER++TELLQGR  + L+
Sbjct: 388 FPTLVKDASLGGQFPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLN 447

Query: 302 VFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMA 361
               PTF+   V E  N   HFIDS+G++SW  F   +DY FV+W+FSGT  EE   L  
Sbjct: 448 DVPAPTFNSLAVTEPNNFVEHFIDSTGVVSWRFFSARSDYDFVEWDFSGTNAEEAECLFG 507

Query: 362 IFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSE 421
           I  +  KEVY+A YE LG   CRI+VPG S++YP EDL + N +M    RE IL+L    
Sbjct: 508 ILEELGKEVYVAVYEELGAPVCRILVPGYSEVYPVEDLIMDNTNMALDYREDILNL--HR 565

Query: 422 WEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQA 481
            + E   +L+E+L+    D++  +  L+G+    +  W  L I ELK ++ LA    E+A
Sbjct: 566 LDDEQLADLVERLEASQLDNYMTIITLIGVEFDENTIWGQLTILELKILICLALQWHEEA 625

Query: 482 LVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAAS 541
           L + +  ++FN +  + ER  +YR +  +L +  +++ +   Y+  F RM+G + +EA  
Sbjct: 626 LEFVDMFLQFNDN--TVERGLFYRAMYAVLEVTLDDEMELGDYITNFTRMFGKETMEAVV 683

Query: 542 AAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAA 582
            ++ G   F+GL+  +  L     HQ L+++Y KL  A+AA
Sbjct: 684 GSVDGSVRFHGLETTNMQLDGLEKHQRLIESYRKLHAARAA 724