Pairwise Alignments

Query, 586 a.a., 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO from Escherichia coli ECRC99

Subject, 742 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  534 bits (1375), Expect = e-156
 Identities = 271/581 (46%), Positives = 374/581 (64%), Gaps = 4/581 (0%)

Query: 2   TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGK 61
           + T+I GKD  LE +IA     L++LG +IE +SW N VPNVWS+HIRD    +CFTNGK
Sbjct: 162 SSTYILGKDLPLEQTIANMTSILAELGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGK 221

Query: 62  GATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGL 121
           GATK++AL SALGE+ ERL+ N+F+ D + G  IAN  FVHYPNEKWF L E+D +P GL
Sbjct: 222 GATKESALCSALGEFIERLNNNFFYNDQFFGVEIANSEFVHYPNEKWFALEEDDVLPAGL 281

Query: 122 LDERLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSN 181
           LD+     Y+P+ EL GS LID  SGN DRGIC +P+ R+SD +TVY P N+I NL++SN
Sbjct: 282 LDDYCLEIYNPDEELCGSHLIDTNSGNSDRGICAIPYKRKSDGETVYFPSNLIENLFLSN 341

Query: 182 GMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEG 241
           GMSAGN   EA VQ LSE+FER VK +II + I LP++P  VL +YP+++  I+ LE +G
Sbjct: 342 GMSAGNNIKEAEVQCLSEIFERAVKRQIIEQEIVLPDVPMSVLEKYPSILAGIKGLEEQG 401

Query: 242 FPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLD 301
           FP+   D SLGGQ+PV+CV L NP  G  FASFGAHP F VALER++TELLQGR  + L+
Sbjct: 402 FPVVVKDASLGGQFPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLN 461

Query: 302 VFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMA 361
               PTF+   V+E  N   HFIDS+G+ISW  F    DY F +W+FSGT +EE   L  
Sbjct: 462 DVPKPTFNSMAVSEPENFVEHFIDSTGVISWRFFSSKHDYEFCEWDFSGTNQEEADRLFG 521

Query: 362 IFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSE 421
           I  +  KEVY+A++  LG  ACRI+VP  S++YP EDL   N +     RE IL+L    
Sbjct: 522 ILEELGKEVYVAEFTELGASACRILVPDYSEVYPVEDLIWDNTNKALDYREDILNL--HS 579

Query: 422 WEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQA 481
              +  +NL+ +L+E   D++T +R L+G+    +  W  L I ELK ++ LA G  E+A
Sbjct: 580 LSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDENTVWGKLTIIELKILIYLALGAHEEA 639

Query: 482 LVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAAS 541
           L      ++FN +  + +R  +++ +  +L +  +ED +   + + F RM+GA+ +E   
Sbjct: 640 LELVGEFLQFNDN--TVKRNLFFQAMSAVLEVTLDEDLELEDFSHNFTRMFGAEVMEQVV 697

Query: 542 AAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAA 582
            +++G+  F GL      L     H  L+++Y+KL  A+ A
Sbjct: 698 GSVTGKIRFSGLTKTSMQLEGIEPHLRLIESYKKLHAARKA 738