Pairwise Alignments

Query, 643 a.a., DNA polymerase III subunit gamma/tau from Escherichia coli ECRC99

Subject, 688 a.a., DNA polymerase III, subunits gamma and tau (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  263 bits (672), Expect = 2e-74
 Identities = 150/366 (40%), Positives = 215/366 (58%), Gaps = 4/366 (1%)

Query: 1   MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60
           MS   L  ++RPQTFA+V GQE V   L+   +  R+  AYLFSGTRGVGKT+IAR+LAK
Sbjct: 1   MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK 60

Query: 61  GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120
            LNCE   T  PC  C+ CR++  G  VD++EID AS   +ED R L + + YAP  GR+
Sbjct: 61  ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180
           KV++IDE HML+R +FNALLKTLEEPP  V F+LATT+P K PVTI+SRC  F  K L  
Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE 180

Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240
            ++   L  +L  E    +P A++L+AR A GS+RD++SL  Q +A G  +++ +    +
Sbjct: 181 NELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGV 240

Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV-QLSP 299
           LG    +    +++A+   +   V A++ +   +G++    L E+      + M+ Q   
Sbjct: 241 LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE 300

Query: 300 AAL-GNDMAAIELRM-RELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357
           AAL   D+   E R   E A     T I   +Q  L G++ +  + +  M +E+ LL  L
Sbjct: 301 AALPALDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTSLEPAMALELLLLN-L 359

Query: 358 AFHPRM 363
           A  PR+
Sbjct: 360 AMLPRL 365