Pairwise Alignments

Query, 643 a.a., DNA polymerase III subunit gamma/tau from Escherichia coli ECRC99

Subject, 587 a.a., DNA polymerase III, subunits gamma and tau (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  290 bits (742), Expect = 1e-82
 Identities = 163/403 (40%), Positives = 244/403 (60%), Gaps = 17/403 (4%)

Query: 3   YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62
           YQVLARK+RP TFAD++GQ+ ++  L N     RI  A++ +G RG GKT+ AR++AKG+
Sbjct: 9   YQVLARKYRPATFADLIGQDAMVRTLRNAFQADRIAQAFMMTGIRGTGKTTTARIIAKGM 68

Query: 63  NCET-----GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTR-DLLDNVQYAPA 116
           NC       G T  PCG CDNCR I  G+ VD+IE+D AS+TK++D R ++LD+V YAPA
Sbjct: 69  NCTGADGAGGPTTDPCGQCDNCRGIMAGQHVDVIEMDGASQTKIDDIRANVLDSVYYAPA 128

Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLK 176
             R+K+++IDEVHMLS  +FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F L+
Sbjct: 129 SARYKIFIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDLR 188

Query: 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA 236
            ++ E +   L  I   E       AL L+ RAAEGS+RDA+SL DQAI+ G G+ + + 
Sbjct: 189 RIEPEVMIAHLRRIAGLERAEITDDALALITRAAEGSVRDAMSLLDQAISHGAGETTAEQ 248

Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296
           V AMLG  D  + + L + ++  +    +  ++   + G +  A+L ++  + H +++++
Sbjct: 249 VRAMLGLADRGRVMDLFDLVMRGDAAGALTELSAQYSDGADPMAVLRDLAEVTHWVSVIK 308

Query: 297 LSPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354
           ++P A  +   + + R R    A  +P   +   +Q LL   +E+  +P+  M  EM ++
Sbjct: 309 ITPDAAEDPTVSPDERARGQAAAAELPMRALTRMWQMLLKALEEVAISPNAMMAAEMAII 368

Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAP 397
           R L     +P PE  V +           MTP    P   +AP
Sbjct: 369 R-LTHVADLPSPEDLVRK--------LQTMTPPPATPGGGAAP 402