Pairwise Alignments

Query, 253 a.a., Type VI secretion system protein TssL from Escherichia coli ECRC99

Subject, 257 a.a., type IV secretion protein DotU from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (477), Expect = 1e-52
 Identities = 92/233 (39%), Positives = 140/233 (60%)

Query: 20  RDYHLALHGNSLNPMIDAATPLLGMVMRLSTMNSQTMPEHLFAQVVTDVQAVEQLLQEQG 79
           +DY   L G++ N +IDAATPL G+ +R+ T+      E ++ Q + +++A+E  L EQG
Sbjct: 25  QDYWFQLRGDNPNVLIDAATPLFGLSLRVRTLTECDNIEQIYRQTIEEIKAIEIELTEQG 84

Query: 80  YEPGVIISFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHFHNEAWGGEKVFILLERLIR 139
           YE  +++++RYILC F+DE+ +G  W   + W + S+L  FHNE WGGEKVF +L RL  
Sbjct: 85  YEHAILMAYRYILCAFLDESVMGTEWGASSLWAEHSMLSRFHNETWGGEKVFTILSRLEG 144

Query: 140 EPKRYQDLLEFLWLCFSLGFRGRYKVAVQDQGEFEQIYRRLYHVLHKLRGDAPFPLLHQD 199
           EP RYQ LL F++ C  LGF G+Y+V    Q E E++  RL+ +L  L    P  L    
Sbjct: 145 EPHRYQALLAFIYHCLILGFEGKYRVMEGGQAEREKVISRLHQLLSSLEESEPQDLTRPT 204

Query: 200 KKTQGGRYQLISRLTVKHIFCGGVVVLALFYLFYLLRLDSQTQDILHQLNKLL 252
                 +Y L  ++ V  +F G +V+    +L Y   L S++ D+L+QLN++L
Sbjct: 205 DHVVRAKYTLSRQMPVWSVFAGFIVLWVGLFLGYSYVLHSKSSDVLNQLNQIL 257