Pairwise Alignments

Query, 385 a.a., DNA-binding transcriptional regulator CdaR from Escherichia coli ECRC99

Subject, 379 a.a., CdaR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (712), Expect = 1e-79
 Identities = 152/376 (40%), Positives = 231/376 (61%), Gaps = 3/376 (0%)

Query: 6   LDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDD 65
           LD+++AQ IV RTM II  NINVM+  G IIGSG++ RIG++H+GA+L L  G  V++  
Sbjct: 3   LDSQLAQQIVDRTMAIIGYNINVMNQAGVIIGSGEKNRIGQVHDGAILALKHGDSVELTA 62

Query: 66  AVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLL 125
                L GV+ GIN+ LR + ++VG++G+TGEP+++R +  LV M+AEM++EQ+ L+  L
Sbjct: 63  ESCVALKGVKPGINMVLRNQQQVVGIVGITGEPKDIRDFANLVKMSAEMIIEQAALVEQL 122

Query: 126 AQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAEL 185
             D R REE +   I    +   L  WA RL IDL++PRV  ++     + G   ++ ++
Sbjct: 123 QWDRRHREEFISAWIHNTLSAAELDAWAARLSIDLSKPRVAVVIAFRQPKSG--QSLDQI 180

Query: 186 QQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDVEDHRKRVEQLITRMKEYGQLR 245
           +Q+   L  PER+NLVA+VS+ E+VVLKP   +   W  E    R+++L+ R+K Y    
Sbjct: 181 RQVVELLEHPERDNLVAVVSMQEIVVLKPC-RTPEHWTSEYESLRIDKLMARLKAYDITG 239

Query: 246 FRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQAN 305
           + ++LG  F  P +I  SY++AK  + +G+ R PE + + Y++L LPVLL  L   WQ  
Sbjct: 240 YDIALGQLFINPNAIHLSYQSAKQVLRIGQVRQPEKQKHLYEELRLPVLLLPLNEGWQGE 299

Query: 306 ELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLD 365
           +  R +  L+  D +G L +TL   F  N      ++ LFIHRNTL YRL +I+E+TG++
Sbjct: 300 QWRRVMQELQTQDKSGQLVKTLKGLFAANGNLNLCAQQLFIHRNTLRYRLEKITEITGIE 359

Query: 366 LGNFDDRLLLYVALQL 381
             +      LY+A QL
Sbjct: 360 TNSLLGLAELYIAYQL 375