Pairwise Alignments

Query, 536 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Escherichia coli ECRC99

Subject, 225 a.a., molybdenum ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 84.0 bits (206), Expect = 5e-21
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 19/229 (8%)

Query: 42  DWSAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLI 101
           DW ++W    L          A ++ L+ +   +F  RAL   +F G+  +  L  + L+
Sbjct: 2   DWQSLWLSGKL----------ALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLV 51

Query: 102 LPVLVAVFGILSVYGRQGWLAS-LCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ 160
           LP  V  + +L  +G + WL   L  + G+E  F      G++LA +  N+P A + + +
Sbjct: 52  LPPTVVGYYLLVSFGSESWLGQWLRNTFGIELVFH---FSGLVLASILVNIPFALQPIQR 108

Query: 161 ALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVTALIFMLCFASFATVLSLGG- 219
           A E IP + R  AA  GM        +E P +   +     L F      F  VL +GG 
Sbjct: 109 AFEAIPVDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGN 168

Query: 220 -GPQATTIELAIYQAL-SYDYDPARAAMLALIQMVCCLGLVLLSQRLSK 266
              +  TI +AIY ++ ++D+D   A +++LI ++  +  + L+  LS+
Sbjct: 169 ISGETKTISIAIYDSVQAFDFD--AAGIMSLILLLFAISALALTTSLSR 215



 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 26/222 (11%)

Query: 328 WQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQAL-EMSGMLILAMPGIVL 386
           WQ+LW S ++AL   V  ++L  + +++ R L   Q    G++L E   M+ L +P  V+
Sbjct: 3   WQSLWLSGKLAL---VTVLILLPLCVFAGRALAYHQ--FRGKSLIEALIMVPLVLPPTVV 57

Query: 387 ATGFFLL------------LNNTIGLPQ--SADGIVIFTNALMAIPYALKVLENPMRDIT 432
             G++LL            L NT G+       G+V+  + L+ IP+AL+ ++     I 
Sbjct: 58  --GYYLLVSFGSESWLGQWLRNTFGIELVFHFSGLVL-ASILVNIPFALQPIQRAFEAIP 114

Query: 433 ARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGND---DFR 489
                     G+     L  +EL  +   L  AL       +G+FGVV + G +   + +
Sbjct: 115 VDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETK 174

Query: 490 TLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFSVIEKIPGR 531
           T+   +Y  + ++      + +LILLL      ++   +  R
Sbjct: 175 TISIAIYDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRR 216