Pairwise Alignments

Query, 102 a.a., RNA chaperone Hfq from Escherichia coli ECRC99

Subject, 80 a.a., RNA-binding protein Hfq from Sinorhizobium meliloti 1021

 Score = 77.0 bits (188), Expect = 4e-20
 Identities = 34/72 (47%), Positives = 55/72 (76%), Gaps = 1/72 (1%)

Query: 3  KGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILL-KNTVSQMVYKHAIST 61
          + Q+LQD FLN +R++++ ++I+L+NG+KL G + SFD F +LL ++  SQ+VYKHAIST
Sbjct: 4  RSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHAIST 63

Query: 62 VVPSRPVSHHSN 73
          ++P +P+    N
Sbjct: 64 IMPGQPLQMFEN 75