Pairwise Alignments

Query, 102 a.a., RNA chaperone Hfq from Escherichia coli ECRC99

Subject, 79 a.a., protein hfq (RNA chaperone hfq) from Phaeobacter inhibens DSM 17395

 Score = 81.6 bits (200), Expect = 2e-21
 Identities = 38/66 (57%), Positives = 55/66 (83%), Gaps = 1/66 (1%)

Query: 5  QSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILL-KNTVSQMVYKHAISTVV 63
          Q+LQD FLN +R+ +VPV+I+L+NG+KLQG I  FD F +LL ++  SQ+VYKHAIST++
Sbjct: 6  QNLQDAFLNHVRKTKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHAISTIM 65

Query: 64 PSRPVS 69
          P++P+S
Sbjct: 66 PAQPIS 71