Pairwise Alignments

Query, 551 a.a., chaperonin GroEL from Escherichia coli ECRC99

Subject, 545 a.a., chaperonin GroEL (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  883 bits (2282), Expect = 0.0
 Identities = 458/551 (83%), Positives = 501/551 (90%), Gaps = 6/551 (1%)

Query: 1   MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAK+V FGNDARVKML GVN+LA+AVKVTLGPKGRNVVLDKSFG+P ITKDGVSVA+EI
Sbjct: 1   MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI 60

Query: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI 120
           ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAI+TEGLKAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI 120

Query: 121 DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG 180
           DKAV AAV ELK LS  C+DSKAIAQVGTISANSDE++G++IA AM+KVGKEGVITVE+G
Sbjct: 121 DKAVIAAVAELKNLSQDCADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG 180

Query: 181 TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV 240
             L++ELDVVEGMQFDRGYLSPYFINKPETG+VEL+ PF+LL DKKISNIRE+LP+LE +
Sbjct: 181 QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL 240

Query: 241 AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV 300
           AK GKPLLI+AEDVEGEALATLVVN MRGIVKVAAVKAPGFGDRRKAMLQD+A LTGGTV
Sbjct: 241 AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV 300

Query: 301 ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY 360
           I+EEIG+ELEKATLEDLG AKRVVI KD TTIIDG GE+A I+ RV+QI+QQIEE+TSDY
Sbjct: 301 IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDY 360

Query: 361 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQER+AKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVV GGGVALI
Sbjct: 361 DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI 420

Query: 421 RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA 480
           RVASK+AD+   NEDQ  G+ +ALRAMEAPLRQI  N GEE SVVAN VK G GNYGYNA
Sbjct: 421 RVASKIADVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA 480

Query: 481 ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG 540
             + YG+M++MGILDPTKVTRSALQ+AAS+AGLMITTE MV +LPK DA D      MGG
Sbjct: 481 GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVAELPKADAPD------MGG 534

Query: 541 MGGMGGMGGMM 551
           MGGMGGMGGMM
Sbjct: 535 MGGMGGMGGMM 545