Pairwise Alignments

Query, 158 a.a., sigma D regulator from Escherichia coli ECRC99

Subject, 152 a.a., Rsd/AlgQ family anti-sigma factor from Pseudomonas fluorescens SBW25-INTG

 Score = 79.0 bits (193), Expect = 3e-20
 Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 15/161 (9%)

Query: 1   MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS 60
           ML    N  ER  G +KL+D WL  R H LV  ++ +G KP     +  N + L DFC  
Sbjct: 1   MLESCQNAQERWGGVHKLIDSWLKAR-HELVRAFDALGAKP---EALAQNREPLQDFCGV 56

Query: 61  LVDYLSAGHFSIYERILHKLEG---NGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDH 117
           LVDY+SAGHF +YE++  + E       L  A  ++P+++A T++++ + D         
Sbjct: 57  LVDYVSAGHFGVYEQLTKEAEAFDDQRGLKLAETLYPRIDAITEKLLAFTDLC------- 109

Query: 118 DNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA 158
           D      +   ++G  L  RF LED LI  VL  A  + PA
Sbjct: 110 DAGQCVAEKFKELGALLHERFELEDCLI-EVLHNAHKEEPA 149