Pairwise Alignments

Query, 181 a.a., transcription termination/antitermination protein NusG from Escherichia coli ECRC99

Subject, 183 a.a., transcription antitermination protein NusG (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  203 bits (517), Expect = 1e-57
 Identities = 97/177 (54%), Positives = 131/177 (74%), Gaps = 1/177 (0%)

Query: 4   APKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERK 63
           A K RWY+V  +SGFE RV  ++RE I+    +D   EV+VPTE+V+E+  G++R S RK
Sbjct: 7   ASKARWYIVHTYSGFENRVEQTIREMIRTGQSQDEIVEVVVPTEKVIELVKGEKRTSTRK 66

Query: 64  FFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPR 123
           F+PGYV+V+M M D SWHLV+S+P+V GF+GG  +RP P+ D E + I+  ++   ++PR
Sbjct: 67  FYPGYVMVKMFMTDFSWHLVQSIPKVTGFVGG-KNRPTPMRDSEAERILAMMESRQEQPR 125

Query: 124 PKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEK 180
           PK  F+ G+ VRV DGPF  FNGVVE+V+Y+K +L+VSVSIFGR TPVELDF QV K
Sbjct: 126 PKFNFDRGDEVRVIDGPFGGFNGVVEDVNYDKGKLRVSVSIFGRQTPVELDFVQVSK 182