Pairwise Alignments

Query, 162 a.a., transcription/translation regulatory transformer protein RfaH from Escherichia coli ECRC99

Subject, 192 a.a., putative transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 42.7 bits (99), Expect = 3e-09
 Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 12/151 (7%)

Query: 4   WYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDP-- 61
           WY+   +    ++  E+L +  +    P+         +R  V   L P  +FV  DP  
Sbjct: 27  WYVALVRMHHEKKVSEYLNKVGIENFVPVQKEIHQWSDRRKLVESVLLPMMVFVHADPKE 86

Query: 62  --EVIHTTTINATRGVSHFVRFGASPAIVPS---AVIHQLSVYKPKDIVDPATPYP-GDK 115
             EV++ TT++        +R  +SPA++P    A    +  Y  + +   ++P   G+K
Sbjct: 87  RMEVLNFTTVSRYM----VMRGESSPAVIPDDQMARFRFMLDYSDETVCMNSSPLARGEK 142

Query: 116 VIITEGAFEGFQAIFTEPDGEARSMLLLNLI 146
           V + +G  +G        DG+++  + LN++
Sbjct: 143 VQVIKGPLQGLVGELVNVDGKSKIAVRLNML 173