Pairwise Alignments

Query, 890 a.a., phosphotransferase RcsD from Escherichia coli ECRC99

Subject, 1236 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 71.6 bits (174), Expect = 3e-16
 Identities = 77/337 (22%), Positives = 146/337 (43%), Gaps = 21/337 (6%)

Query: 422  FRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSLA 481
            F     P+  +   +D  R       L +A++  E     +  F+ N+   ++ P  ++ 
Sbjct: 682  FTQDAQPKRMVGTHKDITRHKSNEVALLEAKQDAELANLYKSEFLANMSHEIRTPMNAII 741

Query: 482  ---ESAAKLNAPESKQ-----LANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLI 533
               + A + +  E ++      +  A  L+R++++I   + +     + E V F +  ++
Sbjct: 742  GMLQLAGRTSLTEQQKDYLDKASFSAQSLLRIINDILDFSKIEAGKLELEKVAFPLDKVL 801

Query: 534  DEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLE 593
            D  +       + KG++LL+   + A  M +GD   L ++L+ L+  AV  TQ G+I L 
Sbjct: 802  DHSLDLNALRAQEKGIELLLYAPVSAGIMLKGDPLRLGQVLINLLSNAVKFTQNGEIELG 861

Query: 594  VDQDESSEDRLT--FRILDTGEGVSIHEMDNLH--FPFINQTQNDRYGKADPLAFWLSDQ 649
             +     + R+T  F + DTG G+S  + D L   F   + +   +YG    L   +S  
Sbjct: 862  CEDVGERDHRITLKFWVRDTGIGISREQQDKLFDAFAQADGSTTRKYG-GTGLGLSISKH 920

Query: 650  LARKLGGHLNIKTRDGLGTRYSVHIKMLAAD-----PEVEEEEERLLDDVCVMVDVTSAE 704
            L   +GG + +++  G+G+ +S  +    A+     P V  E    L  + V  + T+ +
Sbjct: 921  LVSMMGGTMQVESEPGVGSTFSFTVSFEIAEEAKVVPMVVPERLASLRTLVVDDNPTALQ 980

Query: 705  IRNIVTRQLENWGATCITPDE---RLISQDYDIFLTD 738
            I + V R       T  T  E   +L  Q  D+ L D
Sbjct: 981  IYSSVMRDFHFEVETASTGAEALYKLCKQQVDLVLLD 1017