Pairwise Alignments

Query, 890 a.a., phosphotransferase RcsD from Escherichia coli ECRC99

Subject, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 67.8 bits (164), Expect = 3e-15
 Identities = 61/287 (21%), Positives = 128/287 (44%), Gaps = 13/287 (4%)

Query: 447 KLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQS---LAESAAKLNAPESKQ-----LANQ 498
           ++ +A+   E   + +  F+ N+   ++ P      + E A      E ++     +   
Sbjct: 398 EILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMS 457

Query: 499 ADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLK 558
           A+ L+ ++D+I   + +       E + F ++ +  + + +V     +KGL+LL      
Sbjct: 458 ANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPG 517

Query: 559 AHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDE--SSEDRLTFRILDTGEGVS 616
                 GD   LR+ILL L+  A+  T+ G+I + V+  E  ++   L F + DTG G++
Sbjct: 518 VPRRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIA 577

Query: 617 IHEMDNLHFPFINQTQND--RYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHI 674
             + +++   F  +  +   R+G    L   +  +L   +GG + + +  G G+ +   +
Sbjct: 578 PEKQEHIFEAFAQEDSSTTRRFGGTG-LGLTICSRLCELMGGRIWVDSVPGQGSAFHFTL 636

Query: 675 KMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCI 721
           ++        E E RL     +++ V +A  R  +   L +WGAT +
Sbjct: 637 QLPTDGAAAPEPERRLSGKPALLLVVANARQRCRLQGLLASWGATVV 683