Pairwise Alignments

Query, 313 a.a., pseudouridine kinase from Escherichia coli ECRC99

Subject, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 6/289 (2%)

Query: 6   YVVIIGSANID-VAGYSHESLNYADSNPGKIKFTPGGVGRNIA---QNLALLGNKAWLLS 61
           ++++IGSAN D V  + +  +          +   GG G N A     L L  ++   + 
Sbjct: 3   HILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFIC 62

Query: 62  AVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAIT 121
            +G D  G  +     + G+  +   +V   +T + +  + + GE  + I     +  +T
Sbjct: 63  HLGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIA-AGANAHLT 121

Query: 122 AEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCVKVRERLSQI 181
              L +H      A+ ++       E ++  L  A  + +      A    +  + L  +
Sbjct: 122 PLELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWV 181

Query: 182 HTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWS 241
             + PN  EAE L+GI +   ED    A W HQ G+  +V+++G  G + S   G +G  
Sbjct: 182 DIITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISS-PGFTGLI 240

Query: 242 APIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALSCE 290
             +    I+   AGD     L     +GM  A +V FA   S++ ++ E
Sbjct: 241 PALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTRE 289