Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC99

Subject, 344 a.a., flagellar motor protein MotB from Pseudomonas sp. BP01

 Score =  219 bits (558), Expect = 7e-62
 Identities = 124/314 (39%), Positives = 184/314 (58%), Gaps = 25/314 (7%)

Query: 9   IVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLAT 68
           I+VKR K    G   G+WKIA+ADF TAMMAFFLV+WL+S ++P++ I IA YF+ P+  
Sbjct: 7   IIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYFQDPIGF 66

Query: 69  AVTGGDRISNSESPIPGGGDDYTQSQG---EVNKQP-----------NIEELKKRMEQSR 114
             +G   + +      GG  +    +    EV  +P            +E + +++E+ R
Sbjct: 67  TESGTPYVIDL-----GGSPELAPEKTINPEVKSEPMPESTTQMSKDQVETMAEQVERER 121

Query: 115 LRKLRGDLDQLIESDPKLRVLRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRD 174
           L  L  +L   +E +P+L+  +  +  ++ Q+GLRIQI+D++NRPMF  GSA ++PY  D
Sbjct: 122 LELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFED 181

Query: 175 ILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGK 234
           IL A+A  +  +PN+IS+SGHTD  PYA G   + NWELSA+RANA+RR L+ GG   G+
Sbjct: 182 ILLAMADTIKAVPNKISISGHTDAKPYA-GSGEFGNWELSANRANAARRALVAGGYPDGQ 240

Query: 235 VLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVA 294
           V RVVG A++     + P + VNRRI ++VL K+A++     N E +     A      A
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKKAQR-----NIEGEQGAPEAPAADPAA 295

Query: 295 PQVSVPTMPSAEPR 308
           P  S P   +  P+
Sbjct: 296 PPASAPAPGAGAPQ 309