Pairwise Alignments

Query, 248 a.a., scaffolding protein MipA from Escherichia coli ECRC99

Subject, 294 a.a., putative outer membrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 30/255 (11%)

Query: 23  EGKFSLGA--GVGVVEHPYKDY-DTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLS 79
           +G + LG   G G   +P KDY D  +Y +P I Y GD+++F     GY L       ++
Sbjct: 41  KGSWDLGIAFGYGQRTNPLKDYEDIPIYVLPTIAYYGDSWFFDNGAIGYTLTEQERFTVN 100

Query: 80  -ITAY---------WSP--LYFKAKDSGDHQ--------------MRHLDDRKSTMMAGL 113
            IT +         W P  ++      G  +              +  L+ R  T + G+
Sbjct: 101 LITGFSSDRAFFYRWDPSNIFLAGTSRGFREAELSGITSFATLDTIGELESRNFTYLGGI 160

Query: 114 SYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYY 173
               + ++G LR  L  D L+   G    + W Y + +  L+V   +   W S+    YY
Sbjct: 161 EAYVYNRFGTLRLALLHDLLNVHQGTEGQIKWNYHWGHKELSVDFAVFFDWKSQEVVNYY 220

Query: 174 YGVSRKESARSGLRGYNSNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPIVD 233
           YGV   ESA      Y + + W+  LEL+A Y+    W +  TARYT+L+D +  SP++D
Sbjct: 221 YGVRPSESA-YWHEHYRTENGWNRGLELTARYSLTPAWELLMTARYTQLADTIAQSPLLD 279

Query: 234 KSWTGLISTGITYKF 248
           +  +     G  Y+F
Sbjct: 280 EDDSYAYLIGAAYRF 294