Pairwise Alignments

Query, 653 a.a., DNA topoisomerase III from Escherichia coli ECRC99

Subject, 861 a.a., DNA topoisomerase III from Dechlorosoma suillum PS

 Score =  306 bits (783), Expect = 3e-87
 Identities = 212/632 (33%), Positives = 328/632 (51%), Gaps = 40/632 (6%)

Query: 2   RLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARW 61
           +L IAEKPS+A  IA  L     K D + E  N  V++  IGHLLE   P+ Y+ +  +W
Sbjct: 4   QLIIAEKPSVAADIAKALGG-FTKHDDYFESDNF-VLSSAIGHLLELVIPEEYEVKRGKW 61

Query: 62  NLADLPIVPEKWQLQPRPSVTKQLNVIKRYLH--EASEIVHAGDPDREGQLLVDEVLDYL 119
           + A LP++P  ++L+P      +L ++ + +   +   +V+A D  REG+L    + +Y+
Sbjct: 62  SFAHLPVIPPHFELKPVEKTESRLKLLTKLIKRKDVDGLVNACDAGREGEL----IFNYI 117

Query: 120 QLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRA 179
               +  + VQR  +  + PQA+     RLR   E   L  +A+ R+ +DWL GIN TRA
Sbjct: 118 ARHAKSGKAVQRLWLQSMTPQAIRDGFARLRRGEEMQGLGDAAVCRSESDWLVGINGTRA 177

Query: 180 YTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAI 239
            T      G   + +VGRVQTP L LVV R+ +I  F A+ ++EV+A     A E +   
Sbjct: 178 MTAFNSKTGGFHLTTVGRVQTPTLSLVVERERKIREFKARPYWEVEATFAAAAGE-YKGK 236

Query: 240 WQPSEACEPYQDEEG---RLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSA 296
           W         +DE     RL     A+ +  +  GQP  V S   K  ++ +PL F L++
Sbjct: 237 WFDEAFKGKDEDEHARADRLWDEARAKALQAKCEGQPGEV-SEEAKPSTQLSPLLFDLTS 295

Query: 297 LQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEH----------FAGRH- 345
           LQ EA  RFG SA+N L + Q LYE HK++TYPR+D R LPE++          F G + 
Sbjct: 296 LQREANSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRALPEDYLGTVQATLQMFNGENL 355

Query: 346 ------AVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENE 399
                 +V++   + A  +L    V P+   R +++ K+  H AIIPT ++   NL+E E
Sbjct: 356 TKGSDTSVVDRYGIFANKILKSKWVVPN--KRIFNNAKISDHFAIIPTTQAPK-NLSEPE 412

Query: 400 AKIYNLISRQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEEN 459
            K+Y+L+ +++L  F P A +        +A   F  + + L   GW  + G     +E 
Sbjct: 413 QKLYDLVVKRFLAVFFPAAEYLITTRITRVAGEPFKTEGKVLVNPGWLAIYG--REGQEG 470

Query: 460 DGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRAT 519
           D   L  V++G+++  E+  V + +T+PP  +++ATLLSAM G  + V D++L+  + A 
Sbjct: 471 DEGNLVAVSQGEKVQTEEVAVNQNETRPPARYSEATLLSAMEGAGKMVDDEELRAAM-AG 529

Query: 520 DGLGTEATRAGIIELLFKRGFLIKKGRYIHSTDAGKALFHSLPEMA----TRPDMTAHWE 575
            GLGT ATRA IIE L    +L ++GR +  T    +L   L  +     T P++T  WE
Sbjct: 530 RGLGTPATRAQIIEGLITEQYLHREGRELIPTAKAFSLMTLLNGLGISELTSPELTGEWE 589

Query: 576 SVLTQISEKQCRYQDFMQPLVGTLYQLIDQAK 607
             L QI         FMQ +      ++D+AK
Sbjct: 590 WKLAQIERGDLSRSAFMQEIEEMTRHIVDRAK 621