Pairwise Alignments

Query, 1538 a.a., ATP-dependent helicase from Escherichia coli ECRC99

Subject, 739 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score =  130 bits (328), Expect = 4e-34
 Identities = 133/489 (27%), Positives = 209/489 (42%), Gaps = 81/489 (16%)

Query: 45  EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104
           +  ++ A T +GKT AAFL  L  L ++           K   +LYISP+KAL  D    
Sbjct: 48  QDVIIAAATAAGKTEAAFLPILTNLLQD---------TEKPGAVLYISPLKALINDQW-- 96

Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164
                     +R  R   E+ L V    GD  A  + +  ++P  IL+ TPESL  +  +
Sbjct: 97  ----------DRLARLCDELELPVIAWHGDISASRKHRFLKSPEGILLITPESLEALFVN 146

Query: 165 RARET---LRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221
           +          +  +++DE+HA  GS+RG  L   + R++ ++     R+GLSAT+   +
Sbjct: 147 KGTSLAGLFANLRYLVVDELHAFIGSERGKQLQSLMHRVETIIDRPLPRVGLSATLGDMT 206

Query: 222 DVAAFLGGDRP--VTVVNPPA---MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGS 276
             AAFL  + P  V+V+       +   QIR  V       V           HA  E  
Sbjct: 207 LAAAFLRPNAPHHVSVIESKGSGQILKAQIRGYVESKKALPVQPEGDDVFSPDHAIAEH- 265

Query: 277 IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAADAAHFEST 336
                    L +VLR  + ++F NSR           E +A  L+R              
Sbjct: 266 ---------LFQVLRGSNNLIFPNSRTQV--------EWFADNLRRR------------- 295

Query: 337 SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL-RCVVATSSLELGIDMGAVE 395
                N V +        HHGS++K+ R  TE+ALK+G+     V T++LELG+D+G+++
Sbjct: 296 --CEQNGVPNE----FWPHHGSLAKDIREETEKALKAGDRPATAVCTTTLELGVDIGSIK 349

Query: 396 LVIQVATPLSVASGLQRIGRAGHQIGGIS-------------KGLFFPRTRRDLVDSAVI 442
            V+Q+  P SVAS  QR+GR+G + G  +                   R R+ L+ S  +
Sbjct: 350 TVVQIGAPPSVASLRQRLGRSGRRPGEAAILRSYCKERQLDDGSPLSDRLRQGLLQSIAM 409

Query: 443 VECMFAGRLENLTPPHNPLDVLAQHTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFD 501
           +  +  G  E        L  L Q  ++  A        E +S + R+ P+  + +  F 
Sbjct: 410 IRLLMQGWFEPPRVHGLHLSTLVQQCLSVIAQRGGATAAELWSTLIRSGPFTGVEQGSFL 469

Query: 502 ATLDMLSGR 510
           + L  L  R
Sbjct: 470 SLLRALGER 478