Pairwise Alignments

Query, 1538 a.a., ATP-dependent helicase from Escherichia coli ECRC99

Subject, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 93.6 bits (231), Expect = 1e-22
 Identities = 123/463 (26%), Positives = 180/463 (38%), Gaps = 92/463 (19%)

Query: 34  QSQTWHVAARGEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISP 93
           Q++   +   G   +V  PT SGKT    L  L++  R+             +R +Y+ P
Sbjct: 137 QARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLRD-----------PDARAIYLFP 185

Query: 94  IKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILIT 153
           +KAL  D             +        +      I  GDT    R K+   PP +L+T
Sbjct: 186 LKALAQDQLATF--------NALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLT 237

Query: 154 TPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQR 210
            PE L+L L     +       +  V++DEVH   G   GAH+A    RL  +      +
Sbjct: 238 NPEMLHLALLPHHEQWASLFASLTHVVVDEVHTYRG-VLGAHMAQVFRRLRRVCERYGAQ 296

Query: 211 ---IGLSATVRSASDVAAFLGGDRPVTVVN---PPAMRHPQIRIVVPVANMDDVSSVASG 264
              +  SATV +  ++A  L G  P  V     P   RH           +D   S A+ 
Sbjct: 297 PSFVFCSATVGNPGELAHNLTGLTPEVVTESGAPQGKRH--------FIFLDPEESPATA 348

Query: 265 TGEDSHAGREGSIWPYIETGILDEVL-RHRSTIVFTNSRGLAEKLTARLNELYAARLQRS 323
             +                 +L   L R   TIV+  SR + E     L  L+AA     
Sbjct: 349 AIQ-----------------LLRSALKRGLRTIVYCQSRRMTE-----LVSLWAA----- 381

Query: 324 PSIAADAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATS 383
                        SG   +R+         ++      E+R   E  + SG+L  V+ TS
Sbjct: 382 -----------EKSGPYRDRIS--------AYRAGFLPEERRDVEARMASGQLLAVITTS 422

Query: 384 SLELGIDMGAVELVIQVATPLSVASGLQRIGRAGHQIGGISKGLFFPRTRRDLVDSAVI- 442
           +LELGID+G+++L I V  P +V S LQR GR G       +         D +D   + 
Sbjct: 423 ALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGR---ARQESAVVLVAGEDALDQYFMR 479

Query: 443 -VECMFAGRLEN-LTPPHNPLDVLAQHTVAAAAMDALQ-VDEW 482
             E  FA   E+ +  P NP+ +LA+H   AAA   L   D W
Sbjct: 480 HPEDFFARGAEHAVLNPDNPV-ILARHLECAAAEIPLSAADPW 521