Pairwise Alignments

Query, 313 a.a., pseudouridine kinase from Escherichia coli ECRC98

Subject, 321 a.a., PfkB domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 76/273 (27%), Positives = 118/273 (43%), Gaps = 17/273 (6%)

Query: 7   VVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSD 66
           ++ IG+   D+ G +   +      PG+I   PGGV  NIA  L     +  LLSAVG D
Sbjct: 32  ILCIGAVLWDIIGRAPREMKSGYDVPGRISRIPGGVAMNIAMTLCRFDLRPALLSAVGQD 91

Query: 67  FYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEY-- 124
             G  LL      G+ +   ++     T  Y+++  + G ++ AI D +      AE   
Sbjct: 92  AEGDELLAHAEAMGM-ITAHVLRSARPTDRYMAIEGSNG-LIAAIADAHSLEEAGAEILA 149

Query: 125 -LAQHREFIQRAK---VIVADCNISEEALAWILDNA--ANVPVFVDPVSAWKCVKVRERL 178
            LA  R     A    ++  D N+++  LA I ++   A   + V P S  K  ++   L
Sbjct: 150 PLADGRLGCPEAPWRGMVALDGNLTDAMLAEIAESPLFARADLRVAPASPGKARRLLPFL 209

Query: 179 S-QIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGE 237
           S    TL  N +EA  +S       +  A+V       G +R+V++ G +    +D S  
Sbjct: 210 SASAATLHVNLIEANLISDHPSQTTQQAAQVLLGM---GAHRVVITDGANPA--TDASAR 264

Query: 238 SGWS-APIKTNVINVTGAGDAMMAGLASCWVDG 269
              + AP    V  VTGAGD  MA   +  + G
Sbjct: 265 HAHTVAPPPVPVRRVTGAGDTFMAAHMAAEIRG 297