Pairwise Alignments

Query, 285 a.a., HTH-type transcriptional regulator MurR from Escherichia coli ECRC98

Subject, 284 a.a., DNA-binding transcriptional regulator HexR (RefSeq) from Shewanella loihica PV-4

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 8/277 (2%)

Query: 4   LTKIRNAESEFTENEQKIADFLRANVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGF 63
           L K++   + F+++E+K+A+ + A+       S   +AK   +S+ ++ +F ++L  +GF
Sbjct: 4   LEKVQKNLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDTKGF 63

Query: 64  TELRMALIGEYSASREKTNATAQHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYA 123
            + ++ L      ++   N T  ++   +  DDS +    K+      AL+      D A
Sbjct: 64  PDFKLHL------AQSLANGTP-YVSRHVEEDDSPDSYTTKIFESSMAALDTARQSMDTA 116

Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGCDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183
            + K ++++++A  I   GLG SA V  D   K  +    V C  D  +Q        +G
Sbjct: 117 AINKAVDILTQAKKISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSSEG 176

Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEWRSS 243
           DV + IS++G  K ++  A  AR+ GA VIAITS  +SPL       +     E      
Sbjct: 177 DVVVLISHTGRTKSLIDIARLARENGAAVIAITS-RNSPLSAECTLPVTMEVPEDTDMYL 235

Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280
            M++R AQ  + D+L  G          + ++R  E+
Sbjct: 236 PMASRLAQLVIVDVLATGFTLRRGPRFRESLKRVKEV 272