Pairwise Alignments

Query, 372 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Escherichia coli ECRC98

Subject, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  628 bits (1620), Expect = 0.0
 Identities = 318/373 (85%), Positives = 351/373 (94%), Gaps = 1/373 (0%)

Query: 1   MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR 60
           M +++PI+RR STRIYVG+VPIGDGAPIAVQSMTNTRTTDV ATV QIK+LE+VGADIVR
Sbjct: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62

Query: 61  VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM 120
           VSVPTM+AAEAFKLIKQQV+VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNE RIR 
Sbjct: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122

Query: 121 VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV 180
           VVDCARDK IPIRIGVN GSLEKDLQ KYGEPTP+AL+ESAMRHVD LDRLNFDQFKVSV
Sbjct: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182

Query: 181 KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL 240
           KASDVFLAV+SYRLLAK+IDQPLHLGITEAGGAR+G+VKSA+GLG+LL+EGIGDTLR+SL
Sbjct: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV 300
           AADPVEEIKVGFDILKSLRIRSRGINFIACP+CSRQEFDVIGTVNALEQRLED++TPMDV
Sbjct: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302

Query: 301 SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVR-KDRLDNNDMIDQLEARIRAKASQL 359
           SIIGCVVNGPGEA VS LG+ G NKKS  YEDGVR K+R DN+D++ QLEA+IRAKA++L
Sbjct: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARL 362

Query: 360 DEARRIDVQQVEK 372
           DE  RID++ VE+
Sbjct: 363 DEKNRIDIKHVEQ 375