Pairwise Alignments

Query, 372 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Escherichia coli ECRC98

Subject, 384 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Rhodospirillum rubrum S1H

 Score =  394 bits (1011), Expect = e-114
 Identities = 204/360 (56%), Positives = 261/360 (72%), Gaps = 6/360 (1%)

Query: 7   IQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTM 66
           I RR S +I VG+V +G  AP++VQ+MTNT TTDV ATV QI+  +  GADIVRVS P  
Sbjct: 9   ISRRVSRKIRVGSVFVGGDAPVSVQTMTNTLTTDVAATVAQIRRAQEAGADIVRVSCPDE 68

Query: 67  DAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCAR 126
           ++  A K I  QV VP+VADIHF Y+ A++ AE G  CLRINPGNIG+ ER+R VV  A+
Sbjct: 69  ESTAALKAIISQVEVPIVADIHFHYKRAIEAAEAGAACLRINPGNIGSAERVREVVRAAK 128

Query: 127 DKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSVKASDVF 186
           D    +RIGVNAGSLEK+L EKYGEP P+A++ESA+ H   L+  +F +FK+SVKASD F
Sbjct: 129 DHGCSMRIGVNAGSLEKELLEKYGEPCPEAMVESALSHARILEDNDFTEFKISVKASDAF 188

Query: 187 LAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADPVE 246
           LAV +Y+ LA+  D PLHLGITEAGG R G VKSAIG+G +L  GIGDT+RVSL+A P E
Sbjct: 189 LAVAAYKALAEACDYPLHLGITEAGGLRGGTVKSAIGIGSMLWAGIGDTIRVSLSAQPEE 248

Query: 247 EIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDVSIIGCV 306
           E+KVGF+ILKSL +R RG+  ++CP+C+RQ FDVI TV  LE RL  I TP+ +SIIGCV
Sbjct: 249 EVKVGFEILKSLNLRHRGVRVVSCPSCARQGFDVIKTVEVLESRLSHIQTPITLSIIGCV 308

Query: 307 VNGPGEALVSTLGVTGGNK--KSG----LYEDGVRKDRLDNNDMIDQLEARIRAKASQLD 360
           VNGPGEA  + +G+TGG    K G    +Y  G+    ++N  M+D L A +  KA++++
Sbjct: 309 VNGPGEARETDIGLTGGGNLAKEGALNKVYVSGIPDHTINNEAMVDHLVALVEKKAAEIE 368