Pairwise Alignments

Query, 372 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Escherichia coli ECRC98

Subject, 371 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  617 bits (1592), Expect = 0.0
 Identities = 312/361 (86%), Positives = 339/361 (93%), Gaps = 1/361 (0%)

Query: 1   MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR 60
           M+N++PI RR STRIYVG+VPIGDGAPIAVQSMTNTRTTDVEATV QI+ALE VGADIVR
Sbjct: 1   MYNESPIIRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVEATVAQIRALENVGADIVR 60

Query: 61  VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM 120
           VSVPTMDAAEAFK+IKQQ  VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIR 
Sbjct: 61  VSVPTMDAAEAFKVIKQQTKVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120

Query: 121 VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV 180
           VV+CARDKNIPIRIGVN GSLEKDL +KY EPTPQALLESAMRHVD LDRLNFDQFKVSV
Sbjct: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPQALLESAMRHVDILDRLNFDQFKVSV 180

Query: 181 KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL 240
           KASDVFLAVESYRLLAKQI QPLHLGITEAGGAR+GAVKSA+GLG+LL+EGIGDTLR+SL
Sbjct: 181 KASDVFLAVESYRLLAKQIKQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV 300
           AADPVEEIKVGFDILKSLRIRSRGINFIACP+CSRQEFDVI TVN LE+RLED++TPMDV
Sbjct: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIATVNELERRLEDVVTPMDV 300

Query: 301 SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVR-KDRLDNNDMIDQLEARIRAKASQL 359
           SIIGCVVNGPGEALVS +G+TGGN+KSG Y+DGVR K+R DN  ++DQLEA+IRAK + +
Sbjct: 301 SIIGCVVNGPGEALVSDIGLTGGNRKSGYYDDGVRQKERFDNEHIVDQLEAKIRAKVASV 360

Query: 360 D 360
           D
Sbjct: 361 D 361