Pairwise Alignments

Query, 372 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Escherichia coli ECRC98

Subject, 412 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Dechlorosoma suillum PS

 Score =  179 bits (454), Expect = 1e-49
 Identities = 133/401 (33%), Positives = 211/401 (52%), Gaps = 56/401 (13%)

Query: 1   MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR 60
           M +   I RR +  + VG V IG  AP+ VQSMTNT T D  AT  Q   L R G+++VR
Sbjct: 1   MSDPYSIPRRPTLGVKVGGVTIGGDAPVVVQSMTNTDTEDYLATALQTAELARAGSELVR 60

Query: 61  VSVPTMDAAEAFKLIKQQ-----VNVPLVADIHFD-YRI-------ALKVAEYGVDCLRI 107
           ++V T +AA A   I++      ++VPL+ D H++ +R+       A  +A+Y     RI
Sbjct: 61  ITVNTPEAAAAVPKIREHLDRLGLSVPLIGDFHYNGHRLLTDHPECAQALAKY-----RI 115

Query: 108 NPGNIGN----EERIRMVVDCARDKNIPIRIGVNAGSLEKDL-----QEKYGEPTP---- 154
           NPGN+G+    +E+   +++ A   + P+RIGVN GSL++DL      E    P P    
Sbjct: 116 NPGNVGHGKKRDEQFAQMIELACKYDKPVRIGVNWGSLDQDLLARIMDENAKRPEPKDAV 175

Query: 155 ----QALLESAMRHVDHLDRLNF--DQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGIT 208
               +A++ SA+   +    +    D   +S K S V   +  YR L+ +    LHLG+T
Sbjct: 176 QIMREAMVTSALESAEKAVEIGLPADHIVLSCKVSGVQDLIAIYRELSARSRFALHLGLT 235

Query: 209 EAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADP----VEEIKVGFDILKSLRIRSRG 264
           EAG    G V S   +G+LL EGIGDT+RVSL  +P      E+ V  ++L+++ +R+  
Sbjct: 236 EAGMGSKGIVASTAAMGVLLQEGIGDTIRVSLTPEPGGKRTGEVIVAQEMLQTMGLRAFT 295

Query: 265 INFIACPTCSRQEF----DVIGTVNAL------EQRLE-DIITPMDVSIIGCVVNGPGEA 313
               ACP C R       ++  T+         + R E D +  M ++++GCVVNGPGE+
Sbjct: 296 PMVAACPGCGRTTSTFFQELASTIQEYVRAQMPQWRTEYDGVENMTLAVMGCVVNGPGES 355

Query: 314 LVSTLGV----TGGNKKSGLYEDGVRKDRLDNNDMIDQLEA 350
             + +G+    TG    + ++EDG +   L  +++ ++ +A
Sbjct: 356 KHANIGISLPGTGEVPAAPVFEDGEKTVTLRGDNIAEEFKA 396