Pairwise Alignments

Query, 245 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Escherichia coli ECRC98

Subject, 258 a.a., RNA methyltransferase, TrmH family, group 1 from Pseudomonas stutzeri RCH2

 Score =  261 bits (667), Expect = 1e-74
 Identities = 138/248 (55%), Positives = 175/248 (70%), Gaps = 7/248 (2%)

Query: 2   LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAH 61
           LQNIR+VLV TSH GN+G  ARAMK MGL+ L LV+P   P   A+A A+GA+D++  A 
Sbjct: 3   LQNIRVVLVNTSHAGNIGGAARAMKNMGLSRLVLVDPEDFPSPNAVARASGATDILDAAQ 62

Query: 62  IVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAA-NTPVALVFGRERVGL 120
           +V TL+EAL GCSLV+GTSAR R +PWP+LDPREC   SV +A+    VALVFGRE  GL
Sbjct: 63  VVGTLEEALVGCSLVLGTSARDRRIPWPLLDPRECAAVSVEQASGGGEVALVFGREYAGL 122

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPL- 179
           TNEELQ+C YHV I ++P++SSLNLA AVQV+ YEVRMAWLA +    +VE  ET   L 
Sbjct: 123 TNEELQRCQYHVHIPSDPQFSSLNLAAAVQVLTYEVRMAWLAAEGRPTKVEKLETTAMLD 182

Query: 180 -----VDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILA 234
                VD+LE ++GHLEQTL+  GF+    P  +M +LRRL+ R+     E+NILRGIL 
Sbjct: 183 AQPVTVDELENYFGHLEQTLVDIGFLDPAKPRHLMPRLRRLYGRSGISKLEMNILRGILT 242

Query: 235 SIEQQNKG 242
             ++  +G
Sbjct: 243 ETQKAARG 250