Pairwise Alignments

Query, 245 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Escherichia coli ECRC98

Subject, 240 a.a., RNA methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  299 bits (766), Expect = 3e-86
 Identities = 153/238 (64%), Positives = 185/238 (77%), Gaps = 4/238 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIR+VLV TSH GN+GSVARAMKTMGL+NL+L  P  +PD Q++ALAAGA D++ N 
Sbjct: 1   MLSNIRVVLVGTSHPGNIGSVARAMKTMGLSNLYLAEPRCEPDGQSVALAAGACDILKNL 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             V++L EA+  C+LV+GTSARSRTL WP+LDPR+ G K  AEA + PVA+VFGRE  GL
Sbjct: 61  TRVESLHEAIKDCALVIGTSARSRTLDWPLLDPRQAGGKLAAEAVSGPVAIVFGRENHGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
            NEELQ C+YHV I ANPEY SLNLA AVQ+I YE R+A LA +    +V    T YPL+
Sbjct: 121 YNEELQACNYHVFIPANPEYMSLNLAQAVQIICYETRIAHLALENQAAEV----TEYPLM 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQ 238
           ++ ERF+ HLE+TL  TGFI +NHPGQVM KLRRLFTRAR E+ E+NILRGIL SIE+
Sbjct: 177 EENERFFEHLERTLTGTGFIIKNHPGQVMTKLRRLFTRARIENHEMNILRGILTSIEK 234