Pairwise Alignments

Query, 245 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Escherichia coli ECRC98

Subject, 252 a.a., RNA methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  296 bits (759), Expect = 2e-85
 Identities = 153/239 (64%), Positives = 187/239 (78%), Gaps = 4/239 (1%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIR+VLV T+H GN+GS ARAMKTMGL+ L+L  P V PD Q++ALAAGASD++ +A
Sbjct: 1   MLSNIRVVLVGTTHPGNIGSTARAMKTMGLSTLYLAEPKVAPDGQSVALAAGASDILKHA 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             VD L++A+A CSLV+ TSARSRTL WPMLDPR+ G K    A N PVA+VFGRE  GL
Sbjct: 61  VTVDCLEDAIADCSLVIATSARSRTLDWPMLDPRQAGEKLAGAAVNGPVAIVFGRESNGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           +N+ELQKC+YHV I ANPEY+SLNLA AVQ+I YE R+A LA   + E V  EE  YPL 
Sbjct: 121 SNDELQKCNYHVTIPANPEYTSLNLAQAVQIICYEARVAHLAM--DPETV--EEQAYPLA 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 239
            + E F+ HLE+TLL+TGFI + HPGQVM KLRRLF+RAR ESQE+NILRGIL S++++
Sbjct: 177 KEQENFFVHLEKTLLSTGFIIKQHPGQVMTKLRRLFSRARIESQEMNILRGILTSVDKK 235