Pairwise Alignments

Query, 245 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Escherichia coli ECRC98

Subject, 266 a.a., RNA methyltransferase, TrmH family, group 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  121 bits (303), Expect = 2e-32
 Identities = 86/252 (34%), Positives = 129/252 (51%), Gaps = 23/252 (9%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS-----QAIALAAG-AS 54
           ML N+ +VLV+T    N+G VARA   MG  ++ LV+P    ++     +A+ LA     
Sbjct: 1   MLHNLTVVLVKTRFPENVGMVARACANMGARDIVLVDPERWSEADGDPAKAVPLATPKGQ 60

Query: 55  DVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAE-AANTPVALVF 113
           D++    +V TL EA+A C++V GT+AR+      +L P     ++    A    VA+VF
Sbjct: 61  DILSGVRVVGTLAEAVADCAVVFGTTARTGGWRRELLSPERAAAEACPVLAGGDRVAVVF 120

Query: 114 GRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHE 173
           G E  GLTN+E++ CH  + I   PE SSLNLA AV V+ YE  +   AT        H 
Sbjct: 121 GPEDRGLTNDEIEHCHRLLTIPTAPEASSLNLAQAVLVVLYEC-LKGTAT--------HP 171

Query: 174 ETPYPLVD-------DLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQEL 226
             P P  D       +LE  +  L  TLLA  ++R ++P   M  +RR   R R    E 
Sbjct: 172 FRPGPAPDSRLANHAELELLHDTLRDTLLAIDYLRADNPDYFMMPVRRFLGRTRLRRHEF 231

Query: 227 NILRGILASIEQ 238
           +++ G+   +++
Sbjct: 232 DLVMGVCRQVKR 243