Pairwise Alignments

Query, 245 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Escherichia coli ECRC98

Subject, 241 a.a., RNA methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  304 bits (779), Expect = 9e-88
 Identities = 164/244 (67%), Positives = 189/244 (77%), Gaps = 5/244 (2%)

Query: 1   MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA 60
           ML NIR++LV TSH GN+GS ARAMKTMGL+ L+L  P  + D Q+IALAAGASD++ + 
Sbjct: 1   MLSNIRVILVGTSHPGNIGSTARAMKTMGLSTLYLAEPRCEVDGQSIALAAGASDILKHL 60

Query: 61  HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL 120
             VD+L+EA+A CSLV+ TSARSRTL WPMLDPRE G K V E    PVA+VFGRE  GL
Sbjct: 61  VKVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGQKLVTEGLTGPVAIVFGRENHGL 120

Query: 121 TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV 180
           TNEELQ+C YHVAI ANPEYSSLNLA AVQ+I YE R+A LA Q    QVE E   YPL 
Sbjct: 121 TNEELQQCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLA-QTEAPQVEEE---YPLS 176

Query: 181 DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN 240
            DLERF+ HLE TL +TGFI +NHPGQVM KLRRLF+RAR ESQE+NILRGIL SI++  
Sbjct: 177 ADLERFFVHLESTLSSTGFIIKNHPGQVMTKLRRLFSRARIESQEMNILRGILTSIDKV- 235

Query: 241 KGNK 244
            GNK
Sbjct: 236 VGNK 239