Pairwise Alignments

Query, 373 a.a., hydrogenase formation protein HypD from Escherichia coli ECRC98

Subject, 386 a.a., hydrogenase expression/formation protein HypD (RefSeq) from Shewanella amazonensis SB2B

 Score =  329 bits (843), Expect = 9e-95
 Identities = 162/352 (46%), Positives = 220/352 (62%), Gaps = 2/352 (0%)

Query: 17  IEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPM 76
           I  L  R +  +     PL IMEVCGGHTH I K+GL  L+P+NV+FIHGPGCPVCV+P 
Sbjct: 28  IRALAARINSAAQNLSEPLYIMEVCGGHTHTIMKYGLLGLIPDNVKFIHGPGCPVCVMPK 87

Query: 77  GRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENP 136
            RID  + +A   +VI  T GD +RVPG +GSL QA+A GADVR +Y P+DAL +A++NP
Sbjct: 88  ERIDQAIALAKMDDVILLTLGDMIRVPGSKGSLAQARASGADVRPLYDPLDALAIARDNP 147

Query: 137 TRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAF 196
            + VVFF +GFET+ P TA+ LQQA+   + N  F   H+ + P + +++ +P   ++AF
Sbjct: 148 DKTVVFFAIGFETSTPMTAVLLQQAEHAALPNLLFHINHVLVPPAIDAVMAEPATKVNAF 207

Query: 197 LAPGHVSMVIGTDAYNFIASDFQRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRR 256
           + P HVS++ G   Y   A     P+VV+GFEP+D+++ ++ LVE K    S V+ QY R
Sbjct: 208 IGPAHVSVISGAKIYRRAADVHHTPVVVSGFEPVDVMESILRLVELKNLTESVVDVQYSR 267

Query: 257 VVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHF--RPAPQQ 314
            V + GNL AQ  + + F V     WRGLG I  S + L   Y   DAE HF  R   Q+
Sbjct: 268 AVSEEGNLTAQALVDEYFEVRDSFRWRGLGPIPQSALKLKGKYAHRDAEIHFGGRLPVQE 327

Query: 315 VCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQY 366
           + D    +CG++L G   P  C +FG  C PQT  G+ MVSSEGAC A+Y+Y
Sbjct: 328 IDDHKACQCGDILRGLANPMDCKVFGRGCTPQTPLGSCMVSSEGACNAYYRY 379