Pairwise Alignments

Query, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC98

Subject, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  243 bits (619), Expect = 2e-68
 Identities = 162/516 (31%), Positives = 263/516 (50%), Gaps = 55/516 (10%)

Query: 7   VTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPDMPKAAF 66
           VT  N  L+  T ++STT   S+IT+ N  F+++SGF  +EL GQPHNMVRHPDMP AAF
Sbjct: 11  VTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPDMPPAAF 70

Query: 67  ADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATDEEIAAV 126
           A MW TLK G  W G+VKNR KNGDHYWV A A+P+++ GK+  Y S+RT+     + A 
Sbjct: 71  AHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEPSHVQAA 130

Query: 127 EPLYKALNAGRTGKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAMLWFVAAP 186
           E  Y  L   R GK I     +R G+  KL  + L W +      +F  +A +     + 
Sbjct: 131 EKAYAQL---RNGKNILP--KIRLGFHWKL--ILLVWGS------LFASIAIVSLIYPSA 177

Query: 187 VVTYILCALVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDELGLTLRAV 246
           +++ +   L+V   +      ++ P++ + +   K +    + V +  RSDE        
Sbjct: 178 LMSILFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEF------- 230

Query: 247 GQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDEL-------NEHTQQTVDNVQQTVATM 299
           GQL    R    + S+ +  + + S  L K  ++L       N  T +     +Q    +
Sbjct: 231 GQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAI 290

Query: 300 NQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKT--------------MDDIA 345
           N+MAAS+++ +  A  A   S +A++  + G + ++   ++              + ++ 
Sbjct: 291 NEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELE 350

Query: 346 DSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAAN 405
           + +  I  +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA+R+  +  
Sbjct: 351 EHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTM 410

Query: 406 DIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTR 465
           DI+++ID    + +                VA +++ +Q          + AD L+ + +
Sbjct: 411 DIQRMIDTLQGRAKLA--------------VAVMEHSSQQALLSVEQAQQAADALTGIGK 456

Query: 466 AVDELNLITQKNAELVEESAQVSAMVKHRASRLEDA 501
            V ++  ++ + A  V++ + VS  + H  S +  A
Sbjct: 457 RVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMA 492