Pairwise Alignments

Query, 414 a.a., tryptophan permease from Escherichia coli ECRC98

Subject, 414 a.a., tryptophan-specific transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  470 bits (1210), Expect = e-137
 Identities = 236/403 (58%), Positives = 302/403 (74%), Gaps = 2/403 (0%)

Query: 12  SLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLNYRI 71
           SLLGG +II GT +GAGMFSLPVV SG WF +S+  L+  WFCML SGL++LE NL++  
Sbjct: 12  SLLGGAMIIAGTTVGAGMFSLPVVGSGMWFGYSILMLLGIWFCMLMSGLLLLETNLHFEP 71

Query: 72  GSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAG 131
           G+SFDT+TK+ LG+ W +VNG+SIAFVLYILTYAYIS  GSI++H+   M + +P   AG
Sbjct: 72  GASFDTLTKETLGQFWRIVNGVSIAFVLYILTYAYISGGGSIVNHSLQGMGIELPQSVAG 131

Query: 132 FGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESNASYA 191
             F +++A +V +STKAV R+T I+LG  +ITFFL  G+LL  +    L    + N  + 
Sbjct: 132 LVFTVVLACIVLISTKAVDRITTIMLGGMIITFFLAIGNLLIEIDVTKLLE-PDGNQRFI 190

Query: 192 PYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALYTIWLLATMGNI 251
           PYL + LPF LASFGYHGNVPSL+KYYGKD  TI+K +  GT +AL +Y  WL+ATMGNI
Sbjct: 191 PYLWVALPFGLASFGYHGNVPSLVKYYGKDSSTIIKAIFVGTFIALIIYVCWLVATMGNI 250

Query: 252 PRPEFIDIAEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLAD 311
           PR +F +I  +GGN+ VLV ALS V+ S  L+ +L +F+N AVASSFLGVTLGLFDYLAD
Sbjct: 251 PRSQFSEIIAQGGNMGVLVGALSKVMESSWLNSMLTLFANLAVASSFLGVTLGLFDYLAD 310

Query: 312 LFGFDDSAVGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASR 371
           LFGFDDS  GR+KTA++TF PP V GLLFP+GFL AIG+A LAAT+WA IVPAL+A  SR
Sbjct: 311 LFGFDDSRSGRMKTAIVTFVPPTVFGLLFPDGFLIAIGFAALAATVWAVIVPALMAYKSR 370

Query: 372 KRFGSPK-FRVWGGKPMITLILVFGVGNALVHILSSFNLLPVY 413
           + F + + FRV+GG P+I L+++FGV     H+L+  NLLP +
Sbjct: 371 QLFPNHQGFRVFGGTPLIILVVLFGVVTGACHLLAMANLLPQF 413