Pairwise Alignments

Query, 629 a.a., ATP-dependent RNA helicase DeaD from Escherichia coli ECRC98

Subject, 493 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  303 bits (777), Expect = 9e-87
 Identities = 189/479 (39%), Positives = 270/479 (56%), Gaps = 24/479 (5%)

Query: 6   TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65
           T F+DL L   +L+A+++ GY+ P+PIQAE IP  L GRDVLG+AQTG+GKTA+F+LP++
Sbjct: 2   TKFSDLNLDPKVLKAISEAGYDTPTPIQAEAIPPALEGRDVLGIAQTGTGKTASFTLPMI 61

Query: 66  QNLDP---ELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRAL 122
             L       + P+ LVLAPTRELA QVAE    ++KH + +    L GG  +  Q   +
Sbjct: 62  TMLRKGRARARMPRSLVLAPTRELAAQVAENFDIYAKHTK-LTKALLIGGVSFKEQDLLI 120

Query: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQ 182
            +G  +++ TPGRLLDH +RG L L+ +  +V+DEAD ML MGFI D+E I    P   Q
Sbjct: 121 DKGVDVLIATPGRLLDHFERGKLILTDVKVMVVDEADRMLDMGFIPDIEKIFQLTPFTRQ 180

Query: 183 TALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEA------- 235
           T  FSATM   I RIT  F+  P  V +    TT   I+Q        R++ A       
Sbjct: 181 TLFFSATMAPEIERITNTFLSNPARVEVARQSTTSETITQGLVQFKPSRRDRATAFKEKR 240

Query: 236 -LVRFLEAEDFDA---AIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERL 291
            ++R L   + D    AIIF   K     VA++L ++GY++A ++GD+ Q+ R +TL++ 
Sbjct: 241 EMLRALIEREGDGCRNAIIFCNRKMDVDVVAKSLIKHGYDAAPIHGDLEQSQRTKTLDQF 300

Query: 292 KDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN 351
           +DG L  L+A+DVAARGLD+  +S V N+D+P  +E YVHRIGRTGRAGR G  L+    
Sbjct: 301 RDGTLKFLVASDVAARGLDIPNVSHVFNFDVPSHAEDYVHRIGRTGRAGRKGTTLMLAVP 360

Query: 352 RERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQ 411
            + +LL  IE  +KL IP +E P     G    +   +K +++ E    ++     +K +
Sbjct: 361 ADDKLLAAIEDLVKLEIPRIEAP-----GISAPQGGRSKDEERPEPEKRERRSRRRTKPE 415

Query: 412 PTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDR-NDRGPR 469
           P            A A   +A+ E   I  PDA + P     +   RG + R  D GP+
Sbjct: 416 PAKANAPAQAPVAAQAETAVAEAEEAPI--PDAVL-PAARKTETPQRGRKGRARDTGPK 471