Pairwise Alignments

Query, 472 a.a., glutamate synthase subunit GltD from Escherichia coli ECRC98

Subject, 468 a.a., glutamate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  653 bits (1684), Expect = 0.0
 Identities = 310/468 (66%), Positives = 375/468 (80%), Gaps = 2/468 (0%)

Query: 4   NVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCPVHN 63
           N +QFI++ R DP K P   R  +F+EIY+PF++ Q   QADRCL CGNPYCEWKCP+HN
Sbjct: 3   NDFQFIEVGRKDPTKHPAAKRSTQFIEIYQPFAQAQVSEQADRCLDCGNPYCEWKCPLHN 62

Query: 64  YIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIGNIE 123
           YIPNWLKLA +GRI EAA+L H+TNTLPE+CGRVCPQDRLCEG+CTLN +FGAVTIGN+E
Sbjct: 63  YIPNWLKLAQQGRIMEAADLVHETNTLPEICGRVCPQDRLCEGACTLNADFGAVTIGNVE 122

Query: 124 RYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVQAVVFDRHPEIGG 183
           +YI D A   GWRPDMS V    +KVAI+GAGPAGL CAD+L RNGV+AVVFD++P+IGG
Sbjct: 123 KYITDTAIAQGWRPDMSKVTPRKEKVAIVGAGPAGLGCADILARNGVKAVVFDKYPQIGG 182

Query: 184 LLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVGTYQ 243
           LLT+GIPAFKL+K VM  RR +  GMGIEFKL   VG+DV  + LL +YDAVFLG+GTY 
Sbjct: 183 LLTYGIPAFKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVAFNQLLEEYDAVFLGMGTYT 242

Query: 244 SMRGGLENEDADGVYAALPFLIANTKQLMGFGETREEPFVSMEGKRVVVLGGGDTAMDCV 303
           +M+ GLE EDA GVY ALP+LI NT  LMG   + + P++++ GKRVVVLGGGDTAMDCV
Sbjct: 243 AMKAGLEGEDAQGVYQALPYLIGNTHHLMG-STSPDMPYLNLAGKRVVVLGGGDTAMDCV 301

Query: 304 RTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVSGVK 363
           RT+VRQGA  V CAYRRDE NMPGSRREV+NAREEGV F FN QP+ I+   +GKV GV+
Sbjct: 302 RTAVRQGASSVICAYRRDEANMPGSRREVQNAREEGVNFLFNRQPVAIKTQ-DGKVLGVE 360

Query: 364 MVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHSMEWLAKHSVELDSQGRII 423
            V T+MG+ DA GR+RAE + GSE ++ ADAVI+AFGF+P    W A + +ELD  GR+ 
Sbjct: 361 CVETQMGKADASGRQRAEAIVGSEQLLEADAVIIAFGFQPSPAPWFADYGIELDQWGRVK 420

Query: 424 APEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWLE 471
           A + +DN FQT+NPK+FAGGD+VRGSDLVVTAIAEGR AA GI+N+L+
Sbjct: 421 ASKQADNPFQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAAQGILNYLD 468