Pairwise Alignments

Query, 402 a.a., DNA uptake porin HofQ from Escherichia coli ECRC98

Subject, 724 a.a., type IV pilus secretin PilQ/competence protein from Dechlorosoma suillum PS

 Score =  206 bits (525), Expect = 1e-57
 Identities = 143/452 (31%), Positives = 231/452 (51%), Gaps = 69/452 (15%)

Query: 13  KVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLIT 72
           K++L + + PV Q+LQ L E+   N+V+S  VSG++SL L +VPW QA   +++  GL  
Sbjct: 276 KISLNIQNTPVKQLLQTLGEEFGYNVVMSDTVSGSISLRLQNVPWDQAFDLILERGGLDK 335

Query: 73  RQEGNILSVHSIAWQNDNIARQEAE-QARAQAN--LPLENRNITLQYADAGELAKA---- 125
           R+ G +L    IA +++ + ++E E QA+ Q +   PL+     L Y  A    K     
Sbjct: 336 RRRGTVLL---IAPKDELLKKEELELQAKQQISDVEPLKTETFQLNYQRAEAFHKVLTDE 392

Query: 126 GEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSL 185
            +++LS +GS  +D RTN L ++D  T L  L + +A+ D+PV QV + A IV   +   
Sbjct: 393 KQRILSKRGSAVMDPRTNTLFIQDTPTRLEELRKIIAKTDVPVRQVLIEARIVEATDNFS 452

Query: 186 RELGVKWTLADAQH-AGGVGQVT---------------------TLGSDLSVATAT---- 219
           + LGV+    D  +   G G++                      T+ +   + T T    
Sbjct: 453 KNLGVRLGFNDISNPVNGTGRLQSRIGGSMLDQARETYQNVISRTIDATTGIETITRPAK 512

Query: 220 -------------THVGFNIGRING----------------RLLDLELSALEQKQQLDII 250
                        T V      I G                R L+LELSALE   +  ++
Sbjct: 513 VMLDNSATYNNSATSVNLPASAIKGSQAGAFSLVLFNPSATRFLNLELSALEVDGKGKVV 572

Query: 251 ASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKL 310
           +SPR++ S    A I+QG EIPYQ ++  SGAT+V FK+A L ++V P +   GR+ + L
Sbjct: 573 SSPRVMTSDQAEAIIEQGIEIPYQQATS-SGATAVMFKKANLSLKVKPQITPDGRVIMSL 631

Query: 311 HISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGD 370
            I+++VP   +      V+AI  + I+T + V++G T+ +GGI+          +P LGD
Sbjct: 632 DINKDVPDTTIAS---NVIAIKTKHIKTDILVENGGTVVIGGIYEETENQATSRIPFLGD 688

Query: 371 IPWFGQLFRHDGKEDERRELVVFITPRLVSSE 402
           +P+ G LFR+   + ++ EL++FITP++VS +
Sbjct: 689 LPYVGFLFRNTRTDRDKVELLIFITPKIVSGD 720