Pairwise Alignments

Query, 232 a.a., envelope stress response regulator transcription factor CpxR from Escherichia coli ECRC98

Subject, 225 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  182 bits (461), Expect = 6e-51
 Identities = 105/230 (45%), Positives = 144/230 (62%), Gaps = 11/230 (4%)

Query: 1   MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLL-DDSIDLLLLDVMMPKKNG 59
           M+++LL+DDD+EL  LL   L  EGF     HDG+ A   L +     ++LDVM+P  +G
Sbjct: 1   MSELLLIDDDQELCELLISWLAQEGFVAHACHDGKSARQALAEHQPAAVVLDVMLPDGSG 60

Query: 60  IDTLKALRQTH-QTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRS 118
           ++ LK LR  H Q PV+ML+ RG  LDR+LGLELGADDYL KP + REL AR+RA+LRRS
Sbjct: 61  LELLKQLRSEHPQLPVLMLSGRGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRRS 120

Query: 119 HWSEQQQNNDNGSPT-LEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVS 177
                       +P+ +E+  L  +P R  AS  G  + LT +E  +L  L    G+ + 
Sbjct: 121 Q--------PTATPSQVELGDLCYSPARGIASVGGAEVSLTLSEGRILEALLAQPGEPMD 172

Query: 178 REHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYL 227
           ++ L+Q  LG++LT +DR++DMH+SNLRRKL    DG+P    LR RGYL
Sbjct: 173 KQALAQHALGRKLTLYDRSLDMHVSNLRRKLGPHADGNPRIVALRSRGYL 222