Pairwise Alignments

Query, 457 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase from Escherichia coli ECRC98

Subject, 485 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas stutzeri RCH2

 Score =  153 bits (386), Expect = 1e-41
 Identities = 131/464 (28%), Positives = 216/464 (46%), Gaps = 32/464 (6%)

Query: 2   RIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDPQ 61
           RIH +GI G  M G+A +   LG+EV+GSD       +  L+  G ++  G+ A  +   
Sbjct: 20  RIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKE-SASTDRLQSFGAQIFIGHQAGNV-AG 77

Query: 62  PDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGMA 121
            D++++ +A+   NP V   LE+ IP +   + L + ++R R  +AVAGTHGKTTT  + 
Sbjct: 78  ADVLVVSSAVNSANPEVALALEQRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLL 136

Query: 122 TWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYCPRTL 181
             +    G  P FVIGG       +A+LG S + + EADE D       + F+H  P   
Sbjct: 137 ASVFAAGGLDPTFVIGGRLTAAGTNAQLGSSRYLIAEADESD-------ASFLHLQPMVA 189

Query: 182 ILNNLEFDHADIF-DDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTM-AMGCWSEQE 239
           ++ N++ DH   +  D   ++K F   +  +P  G  +   +D  +++ +  +G  +   
Sbjct: 190 VVTNIDADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQIGRPTTTY 249

Query: 240 LVGEQGHWQAKKLTTDA--SEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHVGVA 297
              E    +A  +  +   + + VL DG +  +V   + G HN+ N L  IA A   G+ 
Sbjct: 250 GFSEDADVRAINVRQEGMRTYFTVLRDGCEPLDVSVHMPGNHNVLNALATIAIATDEGID 309

Query: 298 PADAANALGSFINARRRLELRG----EANGVTVYDDFAHHPTAILATLAALRGKVGGTAR 353
                  L  F    RR ++ G    E   V + DD+ HHP  + A + A+RG      R
Sbjct: 310 DEAIIQGLAEFAGVGRRFQVYGDLPVENGSVMLVDDYGHHPREVAAVIKAVRGG-WPERR 368

Query: 354 IIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQ--PA-HIPWQVAEVAEAC------- 403
           ++ V +P   +    +  DD    LG ++ + L++  PA   P   A+  + C       
Sbjct: 369 LVMVYQPHRYSRTRDL-YDDFVQVLGESNVLLLMEVYPAGEDPIPGADSRQLCHSIRQRG 427

Query: 404 -VQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLL 446
            + P +    VD LA +V    + GD +L    G  GG+  +LL
Sbjct: 428 QLDPIYVERGVD-LAPLVKPLLRAGDILLCQGAGDIGGLAPQLL 470