Pairwise Alignments

Query, 457 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase from Escherichia coli ECRC98

Subject, 465 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  586 bits (1511), Expect = e-172
 Identities = 293/456 (64%), Positives = 345/456 (75%), Gaps = 7/456 (1%)

Query: 1   MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDP 60
           M +HILGICGTFMGGLA+LAR  GH VTGSDANVYPPMST LE+QGIELIQG+D SQL  
Sbjct: 1   MHVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQGFDPSQLGD 60

Query: 61  Q---PDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTT 117
               PD+V+IGNAM+RGNPCVEAVL   IPY SGPQ+L D +L +RWVLAV+GTHGKT+T
Sbjct: 61  AGSYPDIVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLVDHILPERWVLAVSGTHGKTST 120

Query: 118 AGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYC 177
           + M  WILE CGY+PGF+IGGVP NF VSARLGES FFV+EADEYD AFFDKRSKFVHY 
Sbjct: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180

Query: 178 PRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSE 237
           PRTL++NNLEFDHADIF DL AIQKQFHH +R VPGQG++IWP +   +KQT+ MGCWSE
Sbjct: 181 PRTLVINNLEFDHADIFADLAAIQKQFHHQIRTVPGQGKVIWPADSHAVKQTIDMGCWSE 240

Query: 238 QELVGEQ---GHWQAKKLTTDASEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHV 294
           QE          W AK L+ D  E+EV  DG+  G + W+L+G+HN+ N +MAIAAARHV
Sbjct: 241 QETYHSSEVTKGWHAKALSDDCHEFEVFFDGQSQGVLDWALIGQHNIENAVMAIAAARHV 300

Query: 295 GVAPADAANALGSFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRGKVGGTARI 354
           GVAP+ A +AL  F+  +RRLEL    NGV+VYDDFAHHPTAI  T+  +R KVG T +I
Sbjct: 301 GVAPSAAIDALARFVPPKRRLELLDTVNGVSVYDDFAHHPTAIATTIKGMRAKVGQT-KI 359

Query: 355 IAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHIPWQVAEVAEACVQPAHWSGDVD 414
             VLEPRSNTMK G+ KD LA S+ +ADE FL Q   I W + E  EA V P      +D
Sbjct: 360 TIVLEPRSNTMKSGVHKDTLAHSMLQADEAFLYQADTIDWNMKEAMEAAVIPVTVLHQID 419

Query: 415 TLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA 450
            +   V  +A+PGD I+VMSNGGFGG+H+KLL  LA
Sbjct: 420 DVVAKVAASAKPGDTIVVMSNGGFGGLHKKLLAALA 455